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XG-DelayNet: An Explainable Graph-Based Machine Learning Framework for Predicting Transportation Delay Propagation in Global Containerized Supply Networks

Abstract

Transportation delay prediction in global supply networks remains challenging because containerized shipments pass through multiple connected actors and locations, including ports, carriers, terminals, customs checkpoints, inland corridors, and transshipment hubs. Although existing machine learning studies in logistics and maritime transportation have improved shipment-level delay prediction, vessel ETA forecasting, and operational risk classification, many models still examine delays as separate prediction events rather than as dynamic disruptions that can spread across interconnected supply-network nodes.  than a network-propagated disruption phenomenon. This study develops XG-DelayNet, an explainable graph-based machine learning framework for predicting transportation delay occurrence, delay duration, and delay propagation risk in global containerized supply networks. The framework models ports, terminals, customs points, and inland logistics hubs as nodes, while shipment routes and trade-lane connections are represented as weighted edges. Shipment attributes, carrier schedule reliability, port dwell time, The prediction inputs are weather severity, customs clearance time, transshipment intensity, edge delay history, and network centrality. We compare the proposed temporal graph neural network with Logistic Regression, Random Forest, XG Boost, Light GBM, LSTM and non-graph neural network. To avoid over-estimating performance, we employ a combination of stratified train-test split, recurrent cross-validation, and out-of-sample validation across shipment routes. The results show that XG-Delay Net has the best performance for the prediction of delay occurrences, with an accuracy of 0.901, F1-score of 0.859, and ROC-AUC of 0.946. The model achieves the lowest MAE of 8.72 hours in predicting delay length, indicating a better error reduction compared to the baseline models. The explainability research shows that port dwell time deviation, carrier schedule unreliability, node betweenness centrality, edge delay history and transshipment count are the most prominent sources of delay. In conclusion, the paper proposes an interpretable network-based approach for understanding and forecasting the emergence and transmission of transportation delays across global containerized supply networks

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